Author

Elise Bornet

Helmholtz Centre for Infection ResearchORCID 0000-0002-5441-292XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Alexander J. WestermanniD· 2 shared Adam M. DeutschbaueriD· 1 shared Christophe BeloiniD· 1 shared Daniel RyaniD· 1 shared David ScheidweileriD· 1 shared Gianluca PrezzaiD· 1 shared Hannah FelchleiD· 1 shared Hannah OchneriD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersMicrobiology

Alexander J. WestermannORCID

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintMay 2, 2026

Oxygen gradients reshape cross-feeding through emergent spatial organization of gut commensal bacteria

David Scheidweiler, Elise Bornet, Hannah Ochner…·Jean‐Marc Ghigo

The paper shows how oxygen gradients in the gut reshape cross-feeding between Bacteroides thetaiotaomicron and Escherichia coli through spatial organization and metabolic feedback.

DOI 10.64898/2026.05.02.721930

humanmetagenomics

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Molecular BiologyNature MicrobiologyPeer-reviewedMar 25, 2024

An integrated transcriptomics-functional genomics approach reveals a small RNA that modulates Bacteroides thetaiotaomicron sensitivity to tetracyclines

Daniel Ryan, Elise Bornet, Gianluca Prezza…·Alexander J. Westermann

The paper identifies a small RNA, MasB, that increases Bacteroides thetaiotaomicron tolerance to tetracyclines by modulating gene expression under antibiotic stress.

32 citationstop 2%

bacteria (other)bulk RNA-seq

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