Nam S. Vo

The paper quantifies the contribution of structural variants to complex trait heritability using MiXeRSV, finding SVs explain up to 32% of heritability in some traits.

This paper introduces a framework for creating population-specific genome references using alternate-contig awareness, demonstrating improved variant calling in Vietnamese populations compared to GRCh38.

VN1K provides a comprehensive multi-omics and phenomics resource for the Vietnamese population, identifying novel variants and functional associations with disease traits and drug responses.

PanTA efficiently constructs large bacterial pangenomes, outperforming existing tools in speed while maintaining accuracy and enabling progressive updates without rebuilding from scratch.

AMRomics is a scalable pipeline for analyzing large microbial genome collections, showing better performance than existing tools.

The paper develops a computational pipeline to identify skin-related genetic variants in the Vietnamese population using WGS and SNP array data, finding similarities with East Asian populations and co-occurring skin traits.

Pasa improves genome scaffolding by using population pangenome graphs, enhancing accuracy and efficiency for bacterial genome assemblies.

LmTag improves tag SNP selection by prioritizing functional SNPs while enhancing imputation accuracy for population-specific genotyping arrays.

This paper evaluates imputation and polygenic score performance of 23 human genotyping arrays across 6 ancestry groups using public and in-house datasets, finding that array selection significantly impacts results.