Author

Paul D. Cotter

Teagasc - The Irish Agriculture and Food Development AuthorityORCID 0000-0002-5465-9068Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Molecular Biology· 1 Scientific Communication & Education· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Arghya MukherjeeiD· 1 shared Babette JakobiiD· 1 shared Brigid LuceyiD· 1 shared Calum J. WalshiD· 1 shared Catherine Dempsey· 1 shared Charlotte OliveriD· 1 shared Conor P. HorganiD· 1 shared Douwe van SindereniD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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1 shared paperScientific Communication & Education

Arghya MukherjeeORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Scientific Communication & EducationFrontiers in MicrobiologyPeer-reviewedJan 9, 2026

Gut MicrobiotAware: how much do we know about gut microbiota? An international questionnaire.

Enriqueta García-Gutiérrez, Sara Arbulu, Charlotte Oliver…·Paul D. Cotter

This study assesses public and healthcare professionals' knowledge of gut microbiota and evaluates their understanding of its health links to improve communication strategies.

1 citation

humanbenchmark study

BioinformaticsMicrobial GenomicsPeer-reviewedJun 7, 2024

FANGORN: A quality-checked and publicly available database of full-length 16S-ITS-23S rRNA operon sequences

Calum J. Walsh, Meghana Srinivas, Timothy Paul Stinear…·John G. Kenny

FANGORN provides a quality-checked database of full-length 16S-ITS-23S rRNA operons to improve microbial community classification and phylogenetic analysis.

13 citations

bacteria (other)long-read sequencing

Molecular BiologybioRxivPreprintApr 5, 2020

Validation of a Lysis Buffer Containing 4 M Guanidinium Thiocyanate (GITC)/ Triton X-100 for Extraction of SARS-CoV-2 RNA for COVID-19 Testing: Comparison of Formulated Lysis Buffers Containing 4 to 6 M GITC, Roche External Lysis Buffer and Qiagen RTL Lysis Buffer

Martina F. Scallan, Catherine Dempsey, John A. MacSharry…·Brigid Lucey

The paper validates a 4M GITC/Triton X-100 lysis buffer for SARS-CoV-2 RNA extraction, showing comparable results to commercial reagents during the COVID-19 pandemic.

23 citations

experimental assay