Author

Fan Zhang

Agricultural Genomics Institute at ShenzhenORCID 0000-0002-5621-5479Unclaimed ORCID profile · follow to get notified of new preprints

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Fan Zhang12 papers · Hong Kong University of Science and Technology

Biology Disciplines

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Bioinformatics· 1 Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Organism:E. coli· 1 Approach:machine learning (classical)· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Hui Xue· 2 shared Yanling PengiD· 2 shared Yongfeng ZhouiD· 2 shared Bilal AhmadiD· 1 shared Fuchun ZhangiD· 1 shared Guotian LiuiD· 1 shared Haixia ZhongiD· 1 shared Hua XiaoiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersGenomics

Hui Xue

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintAug 31, 2026

Two evolutionary histories in one nucleus: genome remodeling and allelic regulation underlying heterosis in hybrid oil palm

Xiangnian Su, Yanling Peng, Xuanwen Yang…·Xianhai Zeng

This study investigates the genetic basis of heterosis in hybrid oil palm by analyzing haplotype-resolved genomes and transcriptomes, revealing complementary gene expression and regulatory mechanisms.

DOI 10.64898/2026.08.27.747553

E. coliwhole-genome sequencing

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GeneticsCurrent BiologyPeer-reviewedAug 1, 2024

Integrative genomics reveals the polygenic basis of seedlessness in grapevine

Xu Wang, Zhongjie Liu, Fan Zhang…·Yongfeng Zhou

This study identifies the polygenic basis of seedlessness in grapevines using integrative genomics, revealing key genes and a machine learning model with 99% prediction accuracy.

38 citationstop 1%

viruswhole-genome sequencing

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BioinformaticsbioRxivPreprintJul 6, 2022

A toolkit to handle T-less alignment for U insertion/deletion RNA editing

Fan Zhang, Ruslan Aphasizhev, Inna Aphasizheva, Liye Zhang

The paper introduces a toolkit for aligning and analyzing U insertion/deletion RNA editing data from kinetoplastid mitochondrial genomes.

DOI 10.1101/2022.07.06.498705

experimental assaysoftware / tool

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