Global population genomics and pangenome of the clubroot pathogen link clonal expansion and effector diversification to resistance breakdown in canola
Muhammad Asim Javed, Florent Sylvestre, Sandra M. Velasco‐Cuervo…·Edel Pérez‐López
Author
The University of SydneyORCID 0000-0002-5645-0161Unclaimed ORCID profile · follow to get notified of new preprints
13 papers
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Muhammad Asim Javed, Florent Sylvestre, Sandra M. Velasco‐Cuervo…·Edel Pérez‐López
Peri A. Tobias, Richard J. Edwards, Jamie L. Botting…·Dora Batista
The paper presents a pseudo-phased genome assembly of H. vastatrix isolate Hv178a, revealing a chromosomal trisomy of chr17 associated with increased virulence.
Tamene T. Tolessa, Scott Ferguson, Ashley Jones…·Rose L. Andrew
The paper identifies a novel class of resistance genes in Myrtaceae, TNJ, characterized by Jacalin domains replacing LRRs, and suggests their role in pathogen recognition.
Peri A. Tobias, Jacob Downs, Sylvie Nolf…·David Ian Guest
The study investigates Rhizoctonia theobromae isolates from cocoa and cassava diseases, finding host specificity, regional divergence, and homothallism.
Zhenyan Luo, Peri A. Tobias, Lavi Singh…·Thaís Regina Boufleur
This study presents a chromosome-level genome of Austropuccinia psidii, revealing its unique genomic features and infection dynamics across diverse hosts.
Maxim Prokchorchik, Matthew A. Campbell, Peri A. Tobias…·Brent N. Kaiser
The paper generates complete genome assemblies for Australian Plasmodiophora brassicae isolates and reveals a unique, highly divergent clade with distinct effector profiles.
Peri A. Tobias, Jacob Downs, Alyssa M Martino, Richard J. Edwards
This paper presents a phased chromosome-level genome assembly for Syzygium luehmannii, annotated with NLR resistance genes to study susceptibility to myrtle rust.
Peri A. Tobias, Jacob Downs, Peter Epaina…·David Ian Guest
The paper uses parentally phased genomes of Theobroma cacao to identify NLR gene clusters at QTLs associated with resistance to vascular streak dieback.
Jinghang Feng, Austin Bird, Zhenyan Luo…·Thaís Regina Boufleur
This study develops a diagnostic method using mating-type HD locus alleles to identify new incursions of the myrtle rust pathogen Austropuccinia psidii.
Stephanie H. Chen, Alyssa M Martino, Zhenyan Luo…·Richard J. Edwards
The paper presents a chromosome-level pseudo-phased genome for Melaleuca quinquenervia and identifies allelic diversity in NLR-type resistance genes using a novel pipeline.
Peri A. Tobias, Richard J. Edwards, Priyanka Surana…·Dora Batista
The paper presents a chromosome-level genome assembly for the coffee rust pathogen Hemileia vastatrix, revealing gene duplication and potential symbiotic or contaminating fungal genomes.
Richard J. Edwards, Chongmei Dong, Robert Park, Peri A. Tobias
The paper presents a chromosome-level phased genome and mitochondrial sequence for the dikaryotic rust fungus Austropuccinia psidii, revealing 18 chromosomes per nucleus and introducing a new tool for chromosome comparison.
Peri A. Tobias, Benjamin Schwessinger, Cecilia Hong Deng…·Robert Park
This paper reports the assembly of a large, highly contiguous genome for Austropuccinia psidii, revealing its expansion through transposable elements and low GC content.