João Paulo Matos Santos Lima

SlytheRINs compares conformational changes in proteins by analyzing residue interaction networks across multiple structures to identify dynamic shifts linked to functional impacts.

RevelioPlots provides an interactive web tool for assessing AI-predicted protein structure quality using pLDDT scores and Ramachandran plots.

This study compares transcriptomic signatures of psoriatic arthritis and ankylosing spondylitis to identify shared and distinct molecular features using integrative omics approaches.

The paper identifies cross-identity peptides between Epstein-Barr virus and central nervous system proteins using computational methods, suggesting molecular mimicry and potential autoantigen cross-reactivity.

This paper develops a low-cost smart system for DNA/RNA detection using visible light and IoT techniques, enabling qualitative and semi-quantitative analysis without UV equipment.

CoRINs compares residue interaction networks from homologous proteins and conformers to analyze conformational changes and amino acid substitutions.

EpitoCore identifies conserved epitopes in bacterial core proteomes across multiple strains to prioritize vaccine candidates.