Author

Jae‐Hyuk Yu

University of Wisconsin–MadisonORCID 0000-0002-6530-8407Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Evolutionary Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:experimental assay· 1 Organism:fungi (other)· 1 Research Focus:host-pathogen & immune response· 1 Approach:machine learning (classical)· 1 Assay:metabolomics· 1 Research Focus:transcription & RNA processing· 1

Frequent Co-Authors

John G. GibbonsiD· 2 shared Alissa A. NoldeniD· 1 shared Anna Huttenlocher AiD· 1 shared Antonis RokasiD· 1 shared Colin O. McCarthyiD· 1 shared Dasol ChoiiD· 1 shared Dianiris Luciano‐RosarioiD· 1 shared E. Anne HatmakeriD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersEvolutionary Biology

John G. GibbonsORCID

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2 papers

Recent·Most cited

Divergent Volatile Metabolomes and Flavor Attributes in Rice Fermented by Aspergillus oryzae and Aspergillus flavus

Colin O. McCarthy, Dasol Choi, Alissa A. Nolden, Eric A. Decker, Jae‐Hyuk Yu, John G. Gibbons

This study compares volatile metabolomes and flavor attributes of rice fermented by Aspergillus oryzae and Aspergillus flavus, finding A. oryzae produces more desirable sensory compounds.

Frontiers in Fungal Biology · Jan 27, 2026Peer-reviewedEvolutionary Biology

Population-Specific Transcriptomic Shifts Underlie Secondary Metabolic Diversification in Aspergillus flavus and the Domestication of Aspergillus oryzae

Milton T. Drott, Yen‐Wen Wang, E. Anne Hatmaker, Nayanna M. Mercado Soto, J. Mitch Elmore, Dianiris Luciano‐Rosario, Jae‐Hyuk Yu, Antonis Rokas, John G. Gibbons, Anna Huttenlocher A, Kunlong Yang, Nancy P. Keller

This paper identifies population-specific transcriptomic shifts in Aspergillus species, showing how transcriptomic reorganization drives secondary metabolic diversification and domestication in A. oryzae.

bioRxiv · Oct 2, 2025 · PreprintMicrobiology