Author

Lu Tan

City University of Hong KongORCID 0000-0002-6685-0468Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Organism:mouse· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Organism:E. coli· 1 Approach:experimental assay· 1

Frequent Co-Authors

Runsheng LiiD· 2 shared Yanwen ShaoiD· 2 shared Zhihao GuoiD· 2 shared Abhishek Kumar VermaiD· 1 shared Alan SarioliD· 1 shared Andrew L. ThurmaniD· 1 shared Beifang LuiD· 1 shared Cori Fain· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersBioinformatics

Runsheng LiORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Longitudinal analysis reveals myeloid cell contributions to neuroPASC pathogenesis

Lu Tan, Shea A. Lowery, Abhishek Kumar Verma, Andrew L. Thurman, Alan Sariol, Cori Fain, John T. Harty, Stanley M. Perlman

This study uses longitudinal single-cell RNA sequencing to show that myeloid cells contribute to sustained neuroinflammation in neuroPASC, with microglia playing a central role.

bioRxiv · May 6, 2026 · PreprintImmunology

Enhanced Detection of RNA Modifications in Escherichia coli Utilizing Nanopore RNA004 Technology

Zhihao Guo, Yanwen Shao, Lu Tan, Beifang Lu, Xin Deng, Sheng Chen, Runsheng Li

The paper evaluates RNA modification detection in E. coli using nanopore RNA004 technology, introduces nanoSundial for improved detection, and identifies 190 modified CDS regions.

Cell Reports Methods · Sep 1, 2025Peer-reviewedBioinformatics

Nanopore direct-RNA sequencing reveals TGEV epitranscriptomic and transcriptomic landscapes modulated by gene 7

Qingqiu Jiang, Zhihao Guo, Lu Tan, Yanwen Shao, Xiaomin Zhao, Haidong Wang, Runsheng Li

This study uses direct RNA sequencing to compare TGEV with and without gene 7, revealing changes in RNA modifications and polyA tails, and their impact on viral replication and host immunity.

bioRxiv · Aug 5, 2025 · PreprintMicrobiology