Author

Anjishnu Banerjee

Medical College of WisconsinORCID 0000-0002-6898-9148Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:machine learning (classical)· 1 Approach:statistical model· 1 Assay:whole-exome sequencing· 1

Frequent Co-Authors

Allison K. LowmaniD· 1 shared Anai KthariiD· 1 shared Ariel Ann NelsoniD· 1 shared Armand Bankhead· 1 shared Ben GeorgeiD· 1 shared Bhabishya Neupane· 1 shared Bradley W. TayloriD· 1 shared Bruce MontgomeryiD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperNeuroscience

Allison K. LowmanORCID

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2 papers

Recent·Most cited

Moving Beyond Binary Biomarkers: Machine Learning Model Resolves Concurrent and Molecularly Heterogeneous Mismatch Repair and Homologous Recombination Deficiencies in Prostate Cancer

Komal Sharma, Divin A. Wilson, Yu Wang, Shabi Haider, Vineel Bhatlapenumarthi, Daniel Boiarsky, John M. Cipriaso, Leo Yermakov, Raja Ram Dutta, Manavita Vashisth, Ilsa M. Coleman, Armand Bankhead, Shantanu K. Jadhav, Bhabishya Neupane, Bradley W. Taylor, , Navonil De Sarkar

This paper develops a machine learning model to identify molecularly distinct DDR subgroups in prostate cancer, revealing concurrent repair deficiencies and improving therapeutic stratification.

bioRxiv · Oct 8, 2025 · PreprintGenomics

Radio-pathomic maps of cell density identify glioma invasion beyond traditional MR imaging defined margins

Samuel A. Bobholz, Allison K. Lowman, Michael Brehler, Fitzgerald Kyereme, Savannah R. Duenweg, John Sherman, Sean D. McGarry, Elizabeth J. Cochran, Jennifer Connelly, Wade M. Mueller, Mohit Agarwal, Anjishnu Banerjee, Peter S. LaViolette

This study develops a radio-pathomic model to predict cellularity in gliomas using MRI data, identifying hypercellular regions beyond traditional imaging margins.

bioRxiv · Apr 7, 2021 · PreprintNeuroscience