Joeselle M. Serrana

Preservation and storage effects on river sediment microbiomes: Implications for community stability and ecological inference

This study examines how preservation and storage conditions affect river sediment microbiomes, finding that frozen storage best preserves community structure and ecological inference.

Haplotype-level metabarcoding revealed the relationship between species occurrence and population genetic structure at the catchment scale in aquatic insects

The paper uses haplotype-level metabarcoding to explore how species occurrence relates to genetic diversity and structure in aquatic insect communities across a catchment.

Pollutant biodegradation profile mediated by multi-trophic microbial dynamics in rivers

This study investigates how multi-trophic microbial interactions influence pollutant biodegradation in rivers, revealing the roles of prokaryotic and eukaryotic communities in mediating environmental effects.

Systematic Metaproteomics Mapping Reveals Functional and Ecological Landscapes of Ex Vivo Human Gut Microbiota Responses to Therapeutic Drugs

This study maps metaproteomic responses of human gut microbiota to 312 drugs, identifying 47 compounds that significantly alter microbial protein profiles and reveal functional state shifts.

Microbial hydrocarbon degradation potential of the Baltic Sea ecosystem

This study identifies microbial communities and their hydrocarbon degradation genes in the Baltic Sea using metagenomics, revealing patterns linked to environmental factors and oil spill history.

Environmental drivers of the resistome across the Baltic Sea

This study examines how environmental factors shape the resistome in the Baltic Sea, finding that salinity and temperature are key drivers of ARG diversity and distribution.

PhyloFunc: Phylogeny-informed Functional Distance as a New Ecological Metric for Metaproteomic Data Analysis

The paper introduces PhyloFunc, a new functional beta-diversity metric for metaproteomic data that incorporates phylogenetic relationships to better capture functional dissimilarities between microbial communities.

Unraveling the genetic structure of the coconut scale insect pest (Aspidiotus rigidus Reyne) outbreak populations in the Philippines

The paper analyzes the genetic structure of coconut scale insect populations in the Philippines, finding two genetically distinct outbreak groups with no recent gene flow between them.