Author

Pingzhuang Ge

Leiden UniversityORCID 0000-0002-6990-5540Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:differential expression· 2 Organism:E. coli· 2 Research Focus:gene regulatory network inference· 2 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1

Frequent Co-Authors

Karin SchnetziD· 2 shared Remus Thei DameiD· 2 shared Baoxu PangiD· 1 shared Fatema‐Zahra M. RashidiD· 1 shared Luuk Gaarthuis· 1 shared Marc K M CajiliiD· 1 shared Minkang TaniD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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2 shared papersMicrobiology

Karin SchnetzORCID

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintOct 12, 2026

Context-dependent regulation of RpoS-dependent and RpoS-independent gene transcription by Crl during exponential growth in Escherichia coli

Pingzhuang Ge, Karin Schnetz, Remus Thei Dame

This study investigates how Crl regulates gene transcription in E. coli during exponential growth, both independently and in conjunction with RpoS, under varying environmental conditions.

DOI 10.64898/2026.10.12.758518

E. colibulk RNA-seq

𝕏 PostBluesky

MicrobiologybioRxivPreprintFeb 11, 2026

Adaptive gene transcription in Escherichia coli under environmental stress

Pingzhuang Ge, Fatema‐Zahra M. Rashid, Luuk Gaarthuis…·Remus Thei Dame

This study investigates how H-NS and StpA regulate gene expression in E. coli under acid and osmotic stress by analyzing transcription, DNA binding, and chromatin structure at specific operons.

DOI 10.64898/2026.02.10.705075

E. coliDNA methylation

𝕏 PostBluesky