Birkir Reynisson

Autoantigen-specific CD8+ T-cell signature in Rheumatoid Arthritis

This study identifies HLA class I-restricted CD8+ T-cell epitopes in RA and shows how citrullination affects antigen recognition and T-cell clonotype stability.

A genome-scale metabolic reconstruction provides insight into the metabolism of the thermophilic bacterium Rhodothermus marinus

The paper constructs a genome-scale metabolic model for Rhodothermus marinus and validates it using growth data and carotenoid production experiments.

Integral use of immunopeptidomics and immunoinformatics for the characterization of antigen presentation and rational identification of BoLA-DR-presented peptides and epitopes

The paper integrates immunopeptidomics and immunoinformatics to characterize BoLA-DR antigen presentation and identify CD4 T cell epitopes with high predictive accuracy.

Improved prediction of MHC II antigen presentation throughintegration and motif deconvolution of mass spectrometryMHC eluted ligand data

The paper improves MHC II epitope prediction by integrating mass spectrometry data with a new machine learning framework, achieving better performance than existing methods.

NNAlign_MA; MHC peptidome deconvolution for accurate MHC binding motif characterization and improved T cell epitope predictions

NNAlign_MA deconvolves poly-specific MHC peptidome data to accurately characterize binding motifs and improve T cell epitope predictions.