Author

Runa Daniel

Queensland University of TechnologyORCID 0000-0002-7262-6972Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:DNA methylation· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Cameron JackiD· 2 shared Dennis B. McNeviniD· 2 shared Eduardo EyrasiD· 2 shared Zaka Wing-Sze YueniD· 2 shared Akanksha SrivastavaiD· 1 shared Maurice StanleyiD· 1 shared Nadine HeiniD· 1 shared Simon JiangiD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 32 mutual co-author links

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2 shared papersGenomics

Cameron JackORCID

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2 papers

Recent·Most cited

Profiling age and body fluid DNA methylation markers using nanopore adaptive sampling

Zaka Wing-Sze Yuen, Somasundhari Shanmuganandam, Maurice Stanley, Simon Jiang, Nadine Hein, Runa Daniel, Dennis B. McNevin, Cameron Jack, Eduardo Eyras

This study uses nanopore adaptive sampling to profile age and body fluid DNA methylation markers, identifying new age-correlated sites and validating known markers.

Forensic Science International Genetics · Apr 15, 2024Peer-reviewedGenomics

Systematic benchmarking of tools for CpG methylation detection from Nanopore sequencing

Zaka Wing-Sze Yuen, Akanksha Srivastava, Runa Daniel, Dennis B. McNevin, Cameron Jack, Eduardo Eyras

The paper benchmarks CpG methylation detection tools from Nanopore sequencing, finding tradeoffs in accuracy and introducing a consensus method, METEORE, to improve results.

Nature Communications · Jun 8, 2021Peer-reviewedBioinformatics