Author

Baubak Bajoghli

Austrian Biolmaging - Verein zur innovativen, korrelativen, multimodalen Bildgebung in ÖsterreichORCID 0000-0002-7368-7523Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 2 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Organism:zebrafish· 3 Approach:statistical model· 2 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Joachim WittbrodtiD· 2 shared Advaita M DickiD· 1 shared Anna C. KögleriD· 1 shared Clara JulsethiD· 1 shared Daniel ČapekiD· 1 shared Erika TsingosiD· 1 shared Eva Hasel de Carvalho· 1 shared Fanny EggeleriD· 1 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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2 shared papersDevelopmental Biology

Joachim WittbrodtORCID

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3 papers

Recent·Most cited

Temperature scaling of developmental tempo reveals reaction-dominated morphogen patterning

Daniel Čapek, Theresia Eich, Anna C. Kögler, Hernán Andrés Morales-Navarrete, Oleksandr Riabtsev, Thomas Thumberger, Leonie Floeth, Johanna I. Bihler, Baubak Bajoghli, Joachim Wittbrodt, Patrick Müller

The paper investigates how morphogen gradients remain robust under temperature-induced changes in developmental tempo in medaka embryos, finding that reaction kinetics, not diffusion, drive this robustness.

bioRxiv · Oct 7, 2026 · PreprintDevelopmental Biology

Immune regulation of neuronal stem cells in the medaka retina

Rashi Agarwal, Joergen Benjaminsen, Katharina Lust, Clara Julseth, Natalia Fuchs, Eva Hasel de Carvalho, Fanny Eggeler, Omnia El Said Ibrahim, Narges Aghaallaei, Baubak Bajoghli, Joachim Wittbrodt

The paper shows microglia phagocytose medaka retinal stem cells under homeostasis, but Ccl25b-Ccr9a signaling is not essential for their maintenance.

Development · Sep 1, 2026Peer-reviewedDevelopmental Biology

Altered thymic niche synergistically drives the massive proliferation of malignant thymocytes

Erika Tsingos, Advaita M Dick, Baubak Bajoghli

This study combines computational modeling and in vivo experiments to show that thymic niche alterations synergize with genetic mutations to drive rapid T-ALL progression in medaka.

bioRxiv · Jun 25, 2024Cancer Biology