Author

Rudolf S.N. Fehrmann

University Medical Center GroningenORCID 0000-0002-7516-315XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Research Focus:gene regulatory network inference· 3 Organism:human· 3 Approach:statistical model· 3 Research Focus:differential expression· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Arkajyoti BhattacharyaiD· 3 shared Marco de BruyniD· 2 shared Mathilde JalvingiD· 2 shared Steven de JongiD· 2 shared Anna K.L. ReynersiD· 1 shared Annechien PlatiD· 1 shared Annegé VledderiD· 1 shared Carlos G. Urzúa-TraslaviñaiD· 1 shared

Activity by Year

2020-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersImmunology

Arkajyoti BhattacharyaORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

The landscape of tertiary lymphoid structures in endometrial cancer revealed through harmonized multi-level transcriptomics

Marta Requesens, Koen Brummel, Arkajyoti Bhattacharya, Feija Somefun, Nienke van Rooij, Annechien Plat, Dimas M. X. van der Hall, Annegé Vledder, René Wardenaar, Diana C.J. Spierings, Eugène Berezikov, Tjalling Bosse, Floris Foijer, Joost Bart, Hans W. Nijman, , Marco de Bruyn

This study characterizes tertiary lymphoid structures in endometrial cancer using multi-level transcriptomics, identifying transcriptional signatures and immune cell dynamics linked to ICI response.

bioRxiv · Aug 20, 2025 · PreprintImmunology

Transcriptional pattern enriched for synaptic signaling is associated with shorter survival of patients with high-grade serous ovarian cancer

Arkajyoti Bhattacharya, Thijs S Stutvoet, Mirela Perla, Stefan Loipfinger, Mathilde Jalving, Anna K.L. Reyners, Paola Drapkin Vermeer, Ronny Drapkin, Marco de Bruyn, Elisabeth G.E. de Vries, Steven de Jong, Rudolf S.N. Fehrmann

eLife · May 13, 2025Peer-reviewedCancer Biology

Robust and independent metabolic transcriptional components in 34,494 patient-derived samples and cell lines: a resource for translational cancer research

Vincent Christiaan Leeuwenburgh, Carlos G. Urzúa-Traslaviña, Arkajyoti Bhattacharya, Marthe T. C. Walvoort, Mathilde Jalving, Steven de Jong, Rudolf S.N. Fehrmann

The paper uses c-ICA on 34,494 bulk expression profiles to define metabolic transcriptional components and their associations with drug sensitivity, patient outcomes, and immune microenvironment.

bioRxiv · Oct 1, 2020 · PreprintBioinformatics