Author

Masashi Ebisawa

RIKENORCID 0000-0002-7645-2674Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:mouse· 2 Assay:scRNA-seq· 2 Research Focus:benchmarking· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:human· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Itoshi NikaidoiD· 2 shared Tetsutaro HayashiiD· 2 shared Akira KurisakiiD· 1 shared Hiroki DannoiD· 1 shared Hisaaki ShinoharaiD· 1 shared Hitomi TakadaiD· 1 shared Johannes Nicolaus WibisanaiD· 1 shared Kaori Y. TanakaiD· 1 shared

Activity by Year

2018-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersMolecular Biology

Itoshi NikaidoORCID

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2 papers

Recent·Most cited

Enhanced transcriptional heterogeneity mediated by NF-κB super-enhancers

Johannes Nicolaus Wibisana, Takehiko Inaba, Hisaaki Shinohara, Noriko Yumoto, Tetsutaro Hayashi, Mana Umeda, Masashi Ebisawa, Itoshi Nikaido, Yasushi Sako, Mariko Okada

The paper investigates NF-κB super-enhancers in B cells, finding they enhance transcriptional variability and gene expression through cis-regulatory interactions and NF-κB binding sites.

PLoS Genetics · Jun 1, 2022Peer-reviewedMolecular Biology

Quartz-Seq2: a high-throughput single-cell RNA-sequencing method that effectively uses limited sequence reads

Yohei Sasagawa, Hiroki Danno, Hitomi Takada, Masashi Ebisawa, Kaori Y. Tanaka, Tetsutaro Hayashi, Akira Kurisaki, Itoshi Nikaido

Quartz-Seq2 improves single-cell RNA-seq by increasing UMI conversion efficiency and gene detection from limited reads using in vitro and in vivo samples.

Genome biology · Mar 9, 2018Peer-reviewedGenomics