Contextual protein and antibody encodings from equivariant graph transformers
Sai Pooja Mahajan, Fátima A. Dávila-Hernández, Jeffrey A. Ruffolo, Jeffrey J. Gray
The paper introduces a method to learn protein and antibody residue representations using equivariant graph transformers, showing structural context can determine amino acid labels and improve antibody design.
Cell Systems · Mar 1, 2025Peer-reviewedBioinformatics