Author

Wenjing Yang

Sun Yat-sen UniversityORCID 0000-0002-7722-2897Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Wenjing Yang1 paper · National Institutes of Health

Biology Disciplines

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Bioinformatics· 2 Developmental Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:benchmarking· 1 Organism:C. elegans· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1

Frequent Co-Authors

Jian‐Rong YangiD· 3 shared Zizhang LiiD· 3 shared Feng CheniD· 2 shared Jingyu CheniD· 2 shared Peng WuiD· 2 shared Xiaoshu CheniD· 2 shared Xiaoyu ZhangiD· 2 shared Xingxing HeiD· 2 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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3 shared papersBioinformatics

Jian‐Rong YangORCID

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3 papers

Recent·Most cited

PASTRI: Resolving Stage-Specific Cell-State Dynamics from Annotated Cell Lineage Trees

Wenjing Yang, Zizhang Li, Xiaochen Yu, Peng Wu, Xiaoyu Zhang, Chenze Ren, Kehui Liu, Jingyu Chen, Feng Chen, Xionglei He, Jiajun Zhang, Xiaoshu Chen, Jianrong Yang

PASTRI infers stage-specific cell-state transition rates from annotated cell lineages, revealing rate-limiting steps and attractor states in development and disease.

bioRxiv · Aug 20, 2026 · PreprintBioinformatics

VIACOT: a web server for interactive visualization and comparison of cell lineage trees

Junnan Yang, Zizhang Li, Xiaoyu Zhang, Feng Chen, Peng Wu, Wenjing Yang, Xingxing He, Yuyan Shan, Jian‐Rong Yang

VIACOT provides a web server for interactive visualization and comparison of cell lineage trees, enabling analysis of correlations and differences in cell fate across datasets.

bioRxiv · Nov 22, 2024 · PreprintBioinformatics

Stereotyped cell lineage trees support robust development

Xiaoyu Zhang, Zizhang Li, Jingyu Chen, Wenjing Yang, Peng Wu, Feng Chen, Xingxing He, Xiaoshu Chen, Jian‐Rong Yang

The paper uses single-cell transcriptomes and lineage trees to show that sub-CLTs are stereotyped across biological replicates, indicating a robust developmental program.

bioRxiv · Feb 23, 2024 · PreprintDevelopmental Biology