Author

Adrián Rošinec

Masaryk UniversityORCID 0000-0002-7748-5590Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Assay:protein structure· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Approach:machine learning (classical)· 1 Research Focus:sequence-to-function modeling· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

David ProcházkaiD· 2 shared Jakub ČillíkiD· 2 shared Jana PorubskáiD· 2 shared Jaroslav OľhaiD· 2 shared Katarína GrešováiD· 2 shared Matej AntoliD· 2 shared Radka Svobodová VařekováiD· 2 shared Terézia SlaninákováiD· 2 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

David ProcházkaORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

AlphaFind v2: Similarity Search in AlphaFold DB and TED Domains across Structural Contexts

Terézia Slanináková, Adrián Rošinec, Jakub Čillík, Aleš Křenek, Katarína Grešová, Jana Porubská, Eva Marsalkova, Jaroslav Oľha, David Procházka, Lukáš Hejtmánek, Vlastislav Dohnal, Karel Berka, Radka Svobodová Vařeková, Matej Antol

AlphaFind v2 enables fast, structure-based search across protein structures and domains, using embeddings and US-align for refinement and supporting organism and CATH-based filtering.

Nucleic Acids Research · Apr 11, 2026Peer-reviewedBioinformatics

AlphaFind: Discover structure similarity across the entire known proteome

David Procházka, Terézia Slanináková, Jaroslav Oľha, Adrián Rošinec, Katarína Grešová, Miriama Jánošová, Jakub Čillík, Jana Porubská, Radka Svobodová Vařeková, Vlastislav Dohnal, Matej Antol

AlphaFind provides a web-based tool for fast structure-based retrieval of protein structures from AlphaFold DB using 3D features and machine learning.

bioRxiv · Feb 15, 2024 · PreprintBioinformatics