The paper introduces the ISA API, a Python library for handling ISA-Tab and ISA-JSON metadata formats, enabling programmatic manipulation and interoperability in life science experiments.

GigaScience · Sep 1, 2021Peer-reviewedBioinformatics

PhenoMeNal: Processing and analysis of Metabolomics data in the Cloud

Kristian Peters, James Bradbury, Sven Bergmann, Marco Capuccini, Marta Cascante, Pedro de Atauri, Timothy M. D. Ebbels, Carles Foguet, Robert Charles Glen, Alejandra N Gonzalez-Beltran, Ulrich L. Günther, Evangelos Handakas, Thomas Hankemeier, Kenneth Haug, Stephanie Herman, , Christoph Steinbeck

PhenoMeNal provides a cloud-based platform for metabolomics data analysis, integrating tools and workflows to enable reproducible and scalable research.

GigaScience · Dec 7, 2018Peer-reviewedBioinformatics

FAIRsharing, a cohesive community approach to the growth in standards, repositories and policies

Susanna-Assunta Sansone, Peter McQuilton, Philippe Rocca-Serra, Alejandra Gonzalez-Beltran, Massimiliano Izzo, Allyson L. Lister, Milo Thurston, And the FAIRsharing community (https://fairsharing.org/communities):

The paper introduces FAIRsharing, a community-driven resource that evaluates and promotes standards, databases, and repositories to improve data reuse and interoperability in research.

bioRxiv · Sep 26, 2018 · PreprintScientific Communication & Education

BioSharing: Harnessing Metadata Standards For The Data Commons

Susanna-Assunta Sansone, Alejandra Gonzalez-Beltran, Philippe Rocca-Serra, Peter McQuilton, Massimiliano Izzo, Allyson Lister, Milo Thurston

The paper describes BioSharing, a resource that catalogs metadata standards to enhance the FAIRness of scientific data and connects them to repositories and policies.

bioRxiv · May 31, 2017 · PreprintScientific Communication & Education