Author

Raphaela Joos

University College CorkORCID 0000-0002-8124-7747Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:human· 2 Assay:metagenomics· 2 Assay:behavioral assay· 1 Research Focus:clustering· 1 Research Focus:development & morphogenesis· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Deirdre M. MurrayiD· 2 shared Firas S. MidaniiD· 2 shared Mairead E. KielyiD· 2 shared Robert A. BrittoniD· 2 shared A. Kyle B. ArdisiD· 1 shared Alisha Beckford· 1 shared Alline Cristina CamposiD· 1 shared Anubhav DasiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersMicrobiology

Deirdre M. MurrayORCID

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2 papers

Recent·Most cited

Infant gut microbiomes contribute to metabolic states that impact brain function

Firas S. Midani, Do-Hun Lee, Younghye Moon, Maggie N. Seale, Thomas D. Horvath, A. Kyle B. Ardis, Jose O Cantu, Emavieve Coles, Jason D. Pizzini, Duolong Zhu, Sean W. Dooling, Grace J. Ahern, Colleen K. Ardis, Alisha Beckford, Nicole M. Ruggiero, , Heather A. Danhof

The paper shows that infant gut microbiomes influence metabolic states that affect brain function, with interventions restoring normal behavior in mice.

bioRxiv · Mar 10, 2026 · PreprintMicrobiology

Early life microbial succession in the gut follows common patterns in humans across the globe

Guilherme Fahur Bottino, Kevin Scott Bonham, Fadheela Patel, Shelley McCann, Michal R. Zieff, Nathalia Ferrazzo Naspolini, Daniel Ho, Theo Portlock, Raphaela Joos, Firas S. Midani, Paulo Alfonso Schüroff, Anubhav Das, Inoli Shennon, Brooke C. Wilson, Justin Martin O'Sullivan, , Vanja Klepac‐Ceraj

The paper develops a model to estimate infant gut microbiome age using metagenomic data, finding conserved microbial succession patterns across diverse human populations.

Nature Communications · Jan 14, 2025Peer-reviewedMicrobiology