Author

Ilkka Ilonen

Brigham and Women's HospitalORCID 0000-0002-8149-3550Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:human· 2 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Ahmed A. Sadek· 1 shared Alex K. ShalekiD· 1 shared Antti S HuuskoneniD· 1 shared Assunta De RienzoiD· 1 shared Benjamin J. WadowskiiD· 1 shared Beow Yong YeapiD· 1 shared David T. SeversoniD· 1 shared Eliisa KekäläineniD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperCancer Biology

Ahmed A. Sadek

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2 papers

Recent·Most cited

Comprehensive multi-site profiling of the malignant pleural mesothelioma micro-environment identifies candidate molecular determinants of histopathologic type

David T. Severson, Samuel T. Freyaldenhoven, Benjamin J. Wadowski, Yin Pun Hung, Travis K. Hughes, Beow Yong Yeap, William G. Richards, Sanna Laaksonen, Lucian R. Chirieac, Matthew Brian Couger, Roderick V. Jensen, Ahmed A. Sadek, Ilkka Ilonen, Kimberly Vermilya, Simona Innocenti, , Raphael Bueno

This study uses single-cell RNA-sequencing and other omics data to analyze the molecular features of pleural mesothelioma subtypes and identify potential drivers of tumor cell states.

Journal of Thoracic Oncology · Nov 28, 2025Peer-reviewedCancer Biology

HHV-6B, HHV-7, and B19V Are Frequently Found DNA Viruses in the Human Thymus but Show No Definitive Link with Myasthenia Gravis

Kirsten Nowlan, Leo Hannolainen, Irini M Assimakopoulou, Pia Dürnsteiner, Joona Sarkkinen, Santeri Suokas, Lea Hedman, Pentti J. Tienari, Klaus Hedman, Mikael Niku, Leena‐Maija Aaltonen, Antti S Huuskonen, Jari Veli Räsänen, Ilkka K Ilonen, Mikko Ilari Mäyränpää, , Eliisa Kekäläinen

This study examines DNA viruses in the thymus of MG patients and controls, finding common viral presence but no specific association with MG.

The Journal of Infectious Diseases · Dec 5, 2024Peer-reviewedImmunology