Qian Liu

The paper evaluates variant calling in difficult genomic regions using short- and long-read sequencing, showing improved performance with new methods and multi-technology approaches.

This paper demonstrates the use of nanopore sequencing to detect thymidine analogs incorporated during DNA replication, enabling high-resolution analysis of replication fork dynamics.

NanoCaller improves SNP and indel detection in difficult genomic regions using long-read sequencing and haplotype-aware deep learning.

The paper combines high-throughput micro-CT-RGB phenotyping with GWAS to identify genetic loci associated with rice tiller growth traits and yield.