Author

Annegien Broeks

The Netherlands Cancer InstituteORCID 0000-0002-8699-5058Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genetics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 2 Approach:statistical model· 2 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:GWAS / association mapping· 1 Assay:GWAS summary statistics· 1 Research Focus:trajectory inference· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Åke BorgiD· 1 shared Alison M. DunningiD· 1 shared Ana BlancoiD· 1 shared Andrew K. GodwiniD· 1 shared Angela CoxiD· 1 shared Anna González‐NeiraiD· 1 shared Arif Bülent EkiciiD· 1 shared Banu AruniD· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperGenetics

Åke BorgORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Karyotype Evolution in Response to Chemoradiotherapy and Upon Recurrence of Esophageal Adenocarcinomas.

Karen van der Sluis, Johanna Wilhelmina van Sandick, Willem J. Koemans, Tom van den Bosch, Annegien Broeks, Dennis D. G. C. Peters, Iris M. Seignette, Christian R. Rausch, Erik van Dijk, Pétur Snæbjörnsson, José G. van den Berg, Nicole C.T. van Grieken, Bauke Ylstra, Beatriz G. Carvalho, Daniël M. Miedema, Liudmila L. Kodach

This study tracks karyotype evolution in esophageal adenocarcinomas during chemoradiotherapy and recurrence, showing that treatment-induced copy number aberrations predict early recurrence and are partially reversed upon recurrence.

Cell Reports · Nov 1, 2024Peer-reviewedBioinformatics

Genome-wide association study identifies 32 novel breast cancer susceptibility loci from overall and subtype-specific analyses

Haoyu Zhang, Thomas U. Ahearn, Julie Lecarpentier, Daniel R. Barnes, Jonathan Beesley, Xia Jiang, Tracy A. O’Mara, Guanghao Qi, Ni Zhao, Manjeet K. Bolla, Alison M. Dunning, Joe Dennis, Qin Wang, Zumuruda Abu Ful, Kristiina Aittomäki, , Peter Hillemanns

This study identifies 32 new breast cancer susceptibility loci through GWAS, with associations varying by tumor subtype and genetic correlations among subtypes.

Nature Genetics · May 18, 2020Peer-reviewedGenetics