Author

Beatriz G. Carvalho

The Netherlands Cancer InstituteORCID 0000-0003-4903-399XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Approach:statistical model· 1

Frequent Co-Authors

Anna VinkeniD· 1 shared Annegien BroeksiD· 1 shared Bauke YlstraiD· 1 shared Christian R. RauschiD· 1 shared Daniël M. MiedemaiD· 1 shared Daniëlle KootiD· 1 shared Dennis D. G. C. PetersiD· 1 shared Erik van DijkiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperCancer Biology

Anna VinkenORCID

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2 papers

Recent·Most cited

Cancer BiologybioRxivPreprintOct 14, 2026

Chromosome 7 gain establishes a just-right WNT signaling state during colorectal tumorigenesis

Irene C. Zaalberg, Paula C. Gasull, Martijn J.M. Vromans…·Susanne M. A. Lens

This study shows that chromosome 7 gain optimizes WNT signaling in colorectal cancer by counteracting excessive stemness from APC mutations.

DOI 10.64898/2026.10.12.758507

humanbulk RNA-seq

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BioinformaticsCell ReportsPeer-reviewedNov 1, 2024

Karyotype Evolution in Response to Chemoradiotherapy and Upon Recurrence of Esophageal Adenocarcinomas.

Karen van der Sluis, Johanna Wilhelmina van Sandick, Willem J. Koemans…·Liudmila L. Kodach

This study tracks karyotype evolution in esophageal adenocarcinomas during chemoradiotherapy and recurrence, showing that treatment-induced copy number aberrations predict early recurrence and are partially reversed upon recurrence.

1 citation

humanwhole-genome sequencing

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