Author

Elizabeth A. Chavez

BC Cancer AgencyORCID 0000-0002-8859-0425Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Christian SteidliD· 3 shared Andrew McPhersoniD· 2 shared Daniel LaiiD· 2 shared Matt WiensiD· 2 shared Pascale Walters· 2 shared Samuel A. J. R. AparicioiD· 2 shared Sohrab P. ShahiD· 2 shared Tim Chan· 2 shared

Activity by Year

2018-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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3 shared papersCancer Biology

Christian SteidlORCID

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3 papers

Recent·Most cited

Cancer BiologybioRxivPreprintMay 12, 2025

Prognostically favorable immune responses to ovarian cancer are distinguished by self-reactive intra-epithelial plasma cells

Allyson C. Banville, Céline M. Laumont, Karanvir Singh…·Brad H. Nelson

The paper identifies self-reactive intra-epithelial plasma cells in ovarian cancer that correlate with improved prognosis and suggest a mechanism for immune response against tumor heterogeneity.

1 citation

humanscRNA-seq

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BioinformaticsbioRxivPreprintJan 16, 2019

Probabilistic cell type assignment of single-cell transcriptomic data reveals spatiotemporal microenvironment dynamics in human cancers

Allen W. Zhang, Ciara H. O’Flanagan, Elizabeth A. Chavez…·Sohrab P. Shah

CellAssign probabilistically assigns cell types to scRNA-seq data, revealing spatiotemporal dynamics in human cancers like ovarian and follicular lymphoma.

9 citations

humanscRNA-seq

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GenomicsbioRxivPreprintSep 13, 2018

Resource: Scalable whole genome sequencing of 40,000 single cells identifies stochastic aneuploidies, genome replication states and clonal repertoires

Emma Laks, Hans Zahn, Daniel Lai…·Samuel A. J. R. Aparicio

13 citations

humanwhole-genome sequencing

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