Author

Ruth Bennett

European Bioinformatics InstituteORCID 0000-0002-9009-4607Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:mouse· 2 Research Focus:database / resource· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Adam FrankishiD· 2 shared Benedict PateniD· 2 shared Cristina SisuiD· 2 shared Jane E. LovelandiD· 2 shared Mark DiekhansiD· 2 shared Mark GersteiniD· 2 shared Paul FlicekiD· 2 shared Andrea Tanzer AiD· 1 shared

Activity by Year

2018-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 43 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Adam FrankishORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

The GENCODE CLS project: massively expanding the lncRNA catalog through capture long-read RNA sequencing

Tamara Perteghella, Gazaldeep Kaur, Sílvia Carbonell Sala, José M. González, Toby Hunt, Tomasz Mądry, Irwin Jungreis, Fabien Degalez, Carme Arnan, Ramil Nurtdinov, Julien Lagarde, Beatrice Borsari, Cristina Sisu, Yunzhe Jiang, Ruth Bennett, , Roderic Guigó

The paper expands the lncRNA catalog using capture long-read RNA sequencing, significantly increasing the number of annotated transcripts in human and mouse genomes.

bioRxiv · Oct 29, 2024 · PreprintGenomics

Multiple laboratory mouse reference genomes define strain specific haplotypes and novel functional loci

Jingtao Lilue, Anthony Doran, Ian T. Fiddes, Monica I. Abrudan, Joel C. Armstrong, Ruth Bennett, William Chow, Joanna Collins, Stephan C. Collins, Anne Czechanski, Petr Danecek, Mark Diekhans, Dirk D. Dolle, Matt Dunn, Richard Michael Durbin, , Thomas Keane

The paper presents full-length de novo genome assemblies for 16 inbred mouse strains, identifying strain-specific haplotypes and novel functional loci, including a large unannotated gene with potential developmental roles.

bioRxiv · Feb 12, 2018 · PreprintGenomics