Author

Ioannis Iliopoulos

University of CreteORCID 0000-0002-9079-0565Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:database / resource· 4 Approach:statistical model· 3 Assay:metagenomics· 2 Approach:benchmark study· 1 Organism:human· 1 Organism:plant (other)· 1 Assay:proteomics· 1

Frequent Co-Authors

Evangelos KaratzasiD· 3 shared Fotis A. BaltoumasiD· 3 shared Georgios A. PavlopoulosiD· 3 shared Dimitrios J. StravopodisiD· 2 shared Eleni AplakidouiD· 2 shared Ilias Georgakopoulos‐SoaresiD· 2 shared Ioannis Z. EmirisiD· 2 shared Iro N Chasapi· 2 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersBioinformatics

Evangelos KaratzasORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

ArthroVerse: mapping protein family diversity across arthropod-associated microbiomes

Iro N Chasapi, Eleni Aplakidou, Maria N Chasapi, Efthimia Lamari, Αλέξανδρος Γαλάρας, Sophia Diplari, Ioannis Iliopoulos, Ioannis Z. Emiris, Ilias Georgakopoulos‐Soares, Solenn Patalano, Dimitrios J. Stravopodis, Evangelos Karatzas, Fotis A. Baltoumas, Nikos Kyrpides, Georgios A. Pavlopoulos

ArthroVerse compiles and annotates protein families from arthropod-associated microbiomes to explore functional diversity and host-microbe interactions.

Nucleic Acids Research · Oct 27, 2026Peer-reviewedBioinformatics

metagRoot: A comprehensive database of protein families associated with plant root microbiomes

Maria N Chasapi, Iro N Chasapi, Eleni Aplakidou, Fotis A. Baltoumas, Evangelos Karatzas, Ioannis Iliopoulos, Dimitrios J. Stravopodis, Ioannis Z. Emiris, Aydın Buluç, Ilias Georgakopoulos‐Soares, Nikos C. Kyrpides, Georgios A. Pavlopoulos

metagRoot provides a database of 71,091 enriched protein families from plant root microbiomes, annotated with structural and functional information to aid in microbiome research.

Nucleic Acids Research · Aug 16, 2025Peer-reviewedBioinformatics

LIRcentral: a manually curated online database of experimentally validated functional LIR-motifs

Agathangelos Chatzichristofi, Vasileios Sagris, Aristos Pallaris, Marios Eftychiou, Ioanna Kalvari, Nicholas Price, Θεοδόσιος Θεοδοσίου, Ioannis Iliopoulos, Ioannis P. Nezis, Vasilis J. Promponas

LIRcentral is a manually curated database of experimentally validated LIR-motifs, providing resources for wet lab and computational research on autophagy-related proteins.

Autophagy · Aug 2, 2023Peer-reviewedBioinformatics

OnTheFly2.0: a text-mining web application for automated biomedical entity recognition, document annotation, network and functional enrichment analysis

Fotis A. Baltoumas, Sofia Zafeiropoulou, Evangelos Karatzas, Savvas Paragkamian, Foteini Thanati, Ioannis Iliopoulos, Aristides G. Eliopoulos, Reinhard Schneider, Lars Juhl Jensen, Evangelos Pafilis, Georgios A. Pavlopoulos

OnTheFly2.0 automates biomedical entity recognition and analysis from documents, revealing inflammatory and senescence pathways in severe COVID-19.

NAR Genomics and Bioinformatics · Oct 4, 2021Peer-reviewedBioinformatics