Author

Eric Mjolsness

University of California, IrvineORCID 0000-0002-9085-9171Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biophysics· 1 Neuroscience· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:gene regulatory network inference· 2 Assay:spatial transcriptomics· 2 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Matthew HuriD· 2 shared Jacob Kim· 1 shared James D. BrunneriD· 1 shared Katherine L. Thompson-PeeriD· 1 shared Kord M. KoberiD· 1 shared Padmini RangamaniiD· 1 shared Patrick T. HwuiD· 1 shared Terrence J. Sejnowski A BiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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2 shared papersNeuroscience

Matthew HurORCID

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3 papers

Recent·Most cited

Implementation of ddaE neuron growth mechanism in graph grammar replicates biological features

Matthew Hur, Patrick T. Hwu, Katherine L. Thompson-Peer, Eric Mjolsness

The paper develops a computational model of ddaE neuron dendrite development using Dynamical Graph Grammar, showing that a single morphogen gradient can generate complex asymmetric branching patterns.

bioRxiv · Jul 30, 2026 · PreprintNeuroscience

Synaptic spine head morphodynamics from graph grammar rules for actin dynamics

Matthew Hur, Thomas M. Bartol, Padmini Rangamani, Terrence J. Sejnowski A B, Eric Mjolsness

The paper models synaptic spine head morphology using graph grammars to simulate actin dynamics and their effects on membrane shape.

bioRxiv · Apr 18, 2025 · PreprintBiophysics

A dynamical system model for predicting gene expression from the epigenome

James D. Brunner, Jacob Kim, Timothy L. Downing, Eric Mjolsness, Kord M. Kober

This paper introduces a stochastic dynamical systems model to predict gene expression from methylation data using a gene regulatory network, and provides software for implementation.

bioRxiv · Aug 3, 2020 · PreprintSystems Biology