Seema B. Plaisier

This study evaluates best practices for improving variant calling on human sex chromosomes by using sex chromosome-informed alignment and accurate ploidy parameters.

The paper examines gene expression changes in tumors with altered sex chromosome complements and finds associations with poorer survival and reduced sex-based gene expression differences.

This paper describes the design and implementation of an online CURE in computational genomics that improved student learning and engagement through asynchronous communication and tailored resources.

The paper identifies sex differences in gene expression in placenta at different pregnancy stages and shows these differences are conserved in adult tissues.