Author

Qi Sun

University of KentuckyORCID 0000-0002-9130-0476Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Qi Sun6 papers · State Key Laboratory of Analytical Chemistry for Life Science

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:benchmarking· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Assay:metabolomics· 1 Assay:scRNA-seq· 1 Research Focus:software / tool· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Jinze LiuiD· 2 shared Autumn V. Hammonds· 1 shared Christopher M. WatersiD· 1 shared Derek B. AllisoniD· 1 shared Harrison A. ClarkeiD· 1 shared Juanita E. FerreiraiD· 1 shared Kimberly J. AbsheriD· 1 shared Lindsey R. ConroyiD· 1 shared

Activity by Year

2021-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Jinze LiuORCID

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2 papers

Recent·Most cited

A Reference-free Approach for Cell Type Classification with scRNA-seq

Qi Sun, Yifan Peng, Jinze Liu

scSimClassify is a reference-free scRNA-seq cell type classifier using k-mer features, achieving better accuracy than traditional methods in four datasets.

iScience · Jul 14, 2021Peer-reviewedBioinformatics

Multi-Dimensional Reduction Clustering of Complex Carbohydrates Reveal Tissue Metabolism, Heterogeneity and Histopathology

Lindsey R. Conroy, Derek B. Allison, Qi Sun, Lyndsay E.A. Young, Tara R. Hawkinson, Harrison A. Clarke, Juanita E. Ferreira, Autumn V. Hammonds, Robert J. McDonald, Kimberly J. Absher, Warren J. Alilain, Christopher M. Waters, Jinze Liu, Ramon C. Sun

The paper introduces Madi, a workflow combining MALDI-MSI and machine learning to analyze FFPE tissues, revealing metabolic patterns and pathological features in human tissues.

bioRxiv · Jun 14, 2021 · PreprintSystems Biology