Author

Sven Berres

Ruhr University BochumORCID 0000-0002-9241-9137Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:deconvolution· 1

Frequent Co-Authors

Julian UszkoreitiD· 2 shared Adrien Noa-BolañoiD· 1 shared Ali Haydar AcikelliiD· 1 shared Andrea TannapfeliD· 1 shared Annabelle KamitziD· 1 shared Anne HöppneriD· 1 shared Carla CasulaiD· 1 shared Crista OchsenfarthiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Julian UszkoreitORCID

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2 papers

Recent·Most cited

From variability to consensus: rescoring harmonizes peptide identification across diverse search engines and datasets

Dirk Winkelhardt, Sven Berres, Julian Uszkoreit

This study benchmarks rescoring methods across proteomics search engines and datasets, finding that prediction-based approaches improve identification consensus and reduce variability.

Journal of Proteome Research · Aug 19, 2026Peer-reviewedBioinformatics

NEURO-IMMUNE CRYPT-ASSOCIATED CELLS AND REST-MEDIATED REPROGRAMMING: PATHOGEN-DRIVEN STROMAL ACTIVATION, HERVS INDUCTION, AND ABORTIVE ANTIVIRAL SIGNALING IN COLORECTAL CARCINOMA

David Díaz-Carballo, Adrien Noa-Bolaño, Udo Udo Rahner, Ali Haydar Acikelli, Sahitya Saka, Jacqueline Klein, Flevy D’Souza, Sascha Malak, Anne Höppner, Annabelle Kamitz, Carla Casula, Lalitha Kamada, Andrea Tannapfel, Jens Christmann, Sarah Albus, , Dirk Strumberg

This paper identifies NICA cells as a pathogen portal in CRC and shows how EBV and HERVs contribute to tumor progression through epigenetic and antiviral mechanisms.

bioRxiv · Oct 21, 2025 · PreprintCancer Biology