Author

Julien Taı̈eb

InsermORCID 0000-0002-9955-4753Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1 Research Focus:gene regulatory network inference· 1 Assay:imaging· 1 Assay:proteomics· 1

Frequent Co-Authors

Alexandre Bourgoin· 1 shared Alexandre FiliotiD· 1 shared Antoine OlivieriD· 1 shared Aziz ZaananiD· 1 shared Benoît SchmauchiD· 1 shared Catherine JuliéiD· 1 shared Delphine Le Corre· 1 shared Dominique LamarqueiD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Alexandre Bourgoin

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

A deep learning-based multiscale integration of spatial omics with tumor morphology.

Benoît Schmauch, Loïc Herpin, Antoine Olivier, Thomas Duboudin, Rémy Dubois, Lucie Gillet, Alexandre Filiot, Jean-Baptiste Schiratti, Valentina Di Proietto, Delphine Le Corre, Alexandre Bourgoin, Julien Taı̈eb, Jean‐François Emile, Wolf H. Fridman, Elodie Pronier, , Eric Y. Durand

This paper introduces MISO, a deep learning method that predicts spatial transcriptomics data from H&E slides, enabling spatially resolved gene expression and patient representation for downstream tasks.

Nature Communications · Nov 27, 2025Peer-reviewedBioinformatics

Plasma protein biomarkers for the early detection of gastric preneoplasia and cancer: a prospective study

Quentin Giai Gianetto, Valérie Michel, Thibaut Douché, Karine Nozeret, Aziz Zaanan, Oriane Colussi, Isabelle Trouilloud, Simon Pernot, Marie‐Noëlle Ungeheuer, Catherine Julié, Nathalie Jolly, Julien Taı̈eb, Dominique Lamarque, Mariette Matondo, Eliette Touati

This study identifies plasma protein biomarkers for early detection of gastric preneoplasia and cancer using proteomics and validation in a cohort, showing high classification performance.

International Journal of Molecular Sciences · Oct 17, 2025Peer-reviewedCancer Biology