Daniel Vodák

The paper introduces CANCAN, a computational framework for analyzing copy number and mutation heterogeneity in DNA sequencing data, showing high concordance with existing methods and improved performance on targeted sequencing data.

The paper shows that sample-index misassignment in tumor exome sequencing can create false somatic variant calls and recommends dual indexing to prevent this.

The paper introduces a tool for interpreting cancer genomes by generating prioritized variant reports for clinical use.

This study benchmarks somatic mutation calling in cancer genomes, identifying inconsistencies and proposing solutions to improve accuracy.