Author
Helmholtz Centre for Environmental ResearchORCID 0000-0003-0031-1565Unclaimed ORCID profile · follow to get notified of new preprints
6 papers
Recent·Most cited
J. Saraiva, Felipe Borim Corrêa, Matthias Bernt…·Antonis Chatzinotas
PHI is a Galaxy-based workflow that automates prophage-host interaction analysis and generates standardized reports, detecting 41 prophages across 14 hosts in a mock community.
Clara María Arboleda-Baena, Felipe Borim Corrêa, Joao Pedro Saraiva…·Stephanie D. Jurburg
HVRLocator identifies hypervariable regions in 16S rRNA datasets to improve metadata quality and enable accurate large-scale microbiome analysis.
Esteban Emanuel Nieto, Nawras Ghanem, Robertina V. Cammarata…·Antonis Chatzinotas
This study isolates and characterizes a novel phage IPK that enhances phenanthrene degradation by its host Paraburkholderia caledonica Bk, showing higher degradation efficiency at higher MOI.
Ulisses Nunes da Rocha, Jonas Coelho Kasmanas, René Kallies…·Peter Florian Stadler
MuDoGeR simplifies genome recovery from metagenomes for non-experts, demonstrating effectiveness across various sample sizes.
Felipe Borim Corrêa, J. Saraiva, Peter Florian Stadler, Ulisses Nunes da Rocha
TerrestrialMetagenomeDB curates and standardizes metadata for terrestrial metagenomes to facilitate comparison and meta-analysis across datasets.
Douglas E. V. Pires, Francislon Silva Oliveira, Felipe Borim Corrêa…·Gabriel da Rocha Fernandes
TAG.ME is a new alignment-independent method for taxonomic assignment of genetic markers, outperforming existing approaches in classifying amplicon sequences from gut and soil samples.