Author

Alexandra Yan

Novosibirsk State UniversityORCID 0000-0003-0305-0612Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1 Organism:mouse· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Nikita TorgunakoviD· 2 shared Polina S. BelokopytovaiD· 2 shared Veniamin FishmaniD· 2 shared Yana StepanchukiD· 2 shared Alexey N. KorableviD· 1 shared Alina A. MatrosovaiD· 1 shared Andrey Dmitrievich ManakhoviD· 1 shared Anna A. KhabarovaiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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2 shared papersGenetics

Nikita TorgunakovORCID

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2 papers

Recent·Most cited

GeneticsEpigenetics & ChromatinPeer-reviewedAug 12, 2025

Direction and modality of transcription changes caused by TAD boundary disruption in Slc29a3/Unc5b locus depends on tissue-specific epigenetic context

Pavel Salnikov, Polina S. Belokopytova, Alexandra Yan…·Veniamin Fishman

The paper shows that disrupting TAD boundaries in the Slc29a3/Unc5b locus causes tissue-specific transcriptional changes in multiple genes.

2 citations

mousebulk RNA-seq

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GenomicsbioRxivPreprintJan 26, 2024

A novel approach for simultaneous detection of structural and single-nucleotide variants based on a combination of chromosome conformation capture and exome sequencing

Maria M. Gridina, Timofey A. Lagunov, Polina S. Belokopytova…·Veniamin Fishman

This paper introduces a method combining exome sequencing and chromosome conformation capture to detect both SNVs and SVs, demonstrating its effectiveness in identifying causative variants in rare disorders.

DOI 10.1101/2024.01.26.577292

whole-exome sequencinglong-read sequencing

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