Author

Magali Cucchiarini

Universitätsklinikum des SaarlandesORCID 0000-0003-0323-8922Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Developmental Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1

Frequent Co-Authors

Andreas KelleriD· 2 shared Eckart U. MeeseiD· 2 shared Paula E Schwarz· 2 shared Shusruto RishikiD· 2 shared Ulrike FischeriD· 2 shared Amila BeganoviciD· 1 shared Christopher E. MasoniD· 1 shared Chunmei FaniD· 1 shared

Activity by Year

2020-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersGenomics

Andreas KellerORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

GenomicsCell Death DiscoveryPeer-reviewedJul 29, 2026

Physiological re-replication during human stem cell differentiation

Marie Minet, Amila Beganovic, Shusruto Rishik…·Ulrike Fischer

The paper shows re-replication is a physiological mechanism in human stem cell differentiation, increasing gene copy numbers to meet protein demands during differentiation.

DOI 10.1038/s41420-026-03267-9

humanDNA methylation

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Developmental BiologybioRxivPreprintJun 16, 2026

Gene amplification during differentiation of mesenchymal stem cells towards chondrocytes

Paula E Schwarz, Magali Cucchiarini, Shusruto Rishik…·Ulrike Fischer

The paper investigates gene amplification dynamics during chondrogenic differentiation of human mesenchymal stem cells and finds that amplifications are transient and stage-specific, correlating with proteoglycan deposition patterns.

DOI 10.64898/2026.06.16.732523

humanbulk RNA-seq

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GenomicsCell Death and DifferentiationPeer-reviewedOct 28, 2020

Single-Cell RNA-Seq Reveals Novel Mitochondria-related Musculoskeletal Cell Populations during Adult Axolotl Limb Regeneration Process

Tian Qin, Chunmei Fan, Tingzhang Wang…·Xiao Chen

This study uses single-cell RNA sequencing to identify novel mitochondria-related musculoskeletal cell populations during axolotl limb regeneration.

43 citations

mousescRNA-seq

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