Author

Fiona Fraser

Earlham InstituteORCID 0000-0003-0378-2987Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:genome assembly· 3 Organism:plant (other)· 3 Research Focus:gene regulatory network inference· 2 Assay:whole-genome sequencing· 2 Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

David SwarbreckiD· 4 shared Tom BarkeriD· 4 shared Alex DurrantiD· 3 shared Gemy KaithakottiliD· 3 shared Naomi IrishiD· 3 shared Christopher Brian WatkinsiD· 2 shared Karim GharbiiD· 2 shared Kendall BakeriD· 2 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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4 shared papersPlant Biology

David SwarbreckORCID

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4 papers

Recent·Most cited

Plant BiologybioRxivPreprintJun 5, 2026

Evolutionary Rewiring of Root Cell-Type Nitrogen Responses

Zhengao Di, Deeksha Singh, Ashleigh Lister…·Nicola J. Patron

The paper shows that nitrogen responses in plant roots are cell-type specific and evolve across species, with NLP7 proteins modulating these responses in Arabidopsis and tomato.

DOI 10.64898/2026.06.05.730053

Arabidopsisplant (other)

𝕏 PostBluesky

GenomicsbioRxivPreprintFeb 28, 2025

High-quality genome assembly for the genetically improved Abbassa Nile tilapia enables the reconstruction of X and Y haplotypes

Graham Etherington, Adam Ciezarek, Tarang K. Mehta…·Wilfried Haerty

The paper presents a high-quality genome assembly for the GIANT Nile tilapia strain, enabling the reconstruction of X and Y haplotypes and identifying sex determination loci on LG23.

DOI 10.1101/2025.02.28.640774

zebrafishwhole-genome sequencing

𝕏 PostBluesky

Plant BiologyG3 Genes Genomes GeneticsPeer-reviewedJan 24, 2025

A haplotype-resolved chromosome-level genome assembly of Urochloa decumbens cv. Basilisk resolves its allopolyploid ancestry and composition

Camilla Ryan, Fiona Fraser, Naomi Irish…·José J. De Vega

9 citations

plant (other)Hi-C

𝕏 PostBluesky

Plant BiologyScientific DataPeer-reviewedDec 18, 2024

Chromosome-scale genome assembly and de novo annotation of Alopecurus aequalis.

Jonathan Wright, Kendall Baker, Tom Barker…·Dana R. MacGregor

This study presents a chromosome-scale genome assembly and annotation of Alopecurus aequalis, revealing its genetic similarity to barley and expansion of herbicide resistance genes.

6 citations

plant (other)whole-genome sequencing

𝕏 PostBluesky