Graham Etherington

This study links chromatin accessibility divergence to phenotypic diversity in cichlid fishes by analyzing ATAC-seq and transcriptomes across multiple tissues and species.

This study characterizes the demographic decline and recovery of the British European polecat population using whole-genome analyses, revealing a genetic bottleneck and admixture events.

The paper presents a high-quality genome assembly for the GIANT Nile tilapia strain, enabling the reconstruction of X and Y haplotypes and identifying sex determination loci on LG23.

The paper presents a telomere-to-telomere genome assembly of S. japonicus, revealing a previously unknown second centromere-like region and revising the genome size estimate.

The paper presents a chromosome-level genome assembly for the GIFT tilapia strain, identifying introgressed regions from O. mossambicus associated with growth and immunity traits.

The paper introduces a Galaxy-based suite for scRNA-seq analysis, offering workflows, training resources, and tools for preprocessing, normalization, and clustering across 10x and alternative platforms.

The paper evaluates de novo genome assembly methods for a low-quality non-model mammal sample, finding that more data types do not always improve assembly quality.

The paper maps multiple loci in tomato genomes associated with resistance to the Cladosporium fulvum effector Ecp5, identifying distinct Cf-Ecp5 genes in different accessions.

The paper develops Galaxy-based tools for scRNA-seq quality control and analysis, making the process more accessible through simple scripts and a user-friendly interface.

The paper reports on a crowdsourced project analyzing ash dieback fungus data, revealing insights into its genome and biology through community contributions.