Bernard de Bono

The paper describes the Common Fund Data Ecosystem (CFDE), which integrates NIH Common Fund data resources to enable discovery, analysis, and collaboration across heterogeneous datasets.

The paper introduces a knowledge graph framework for integrating and querying biomedical data across domains, demonstrating its utility in eight use cases.

The paper describes the development of SCKAN, a knowledgebase of autonomic nervous system connectivity, and its use in generating anatomical and functional maps.

This paper describes the construction and usage of the Human Reference Atlas (HRA) v2.0, which integrates multiscale data across 36 organs and provides tools for analysis and visualization.

The paper constructs a reproductive toxicity knowledge graph (ReproTox-KG) to link birth defects, drugs, and genes, identifying potential molecular mechanisms for drug-induced birth defects.

The paper describes the development and implementation of a vocabulary extension pipeline for the SPARC program to improve FAIR data practices in autonomic nervous system research.

The paper describes the development of a resource for the autonomic nervous system community, including databases, connectivity maps, and simulation tools.

The paper annotates biological models with semantic annotations and develops a web tool to help users discover relevant models in the Physiome Model Repository.