Author

Atul Atul

Indraprastha Institute of Information Technology DelhiORCID 0000-0003-0845-0711Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 1 Assay:protein structure· 1 Approach:statistical model· 1

Frequent Co-Authors

Arjun RayiD· 2 shared Mrinal· 2 shared Sukriti SacheriD· 2 shared Abel Xavier Francis· 1 shared Mansi Chilkoti· 1 shared Parth Garg· 1 shared Prutyay Gautam· 1 shared

Activity by Year

2022-2024 · peak 1/yr

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7 top collaborators · 17 mutual co-author links

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2 shared papersBioinformatics

Arjun RayORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintNov 6, 2024

An algorithm-based investigation reveals the differential dynamics of water inside protein cavity as a function of distance from its wall

Abel Xavier Francis, Mansi Chilkoti, Atul Atul…·Arjun Ray

The paper develops a tool to analyze water dynamics inside protein cavities using MD simulations, showing its ability to distinguish cavity water from bulk solvent and characterize its dynamic properties.

DOI 10.1101/2024.11.06.622213

statistical model

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedFeb 1, 2022

CICLOP: A Robust, Faster, and Accurate Computational Framework for Protein Inner Cavity Detection

Parth Garg, Sukriti Sacher, Mrinal…·Arjun Ray

CICLOP detects protein inner cavities with high accuracy, providing residue details, cavity dimensions, and physicochemical properties for functional analysis.

8 citations

protein structureexperimental assay

𝕏 PostBluesky