Author

Jingyi Cui

University of VirginiaORCID 0000-0003-0868-9300Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Molecular Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:diffusion model· 1 Research Focus:protein design· 1 Assay:protein structure· 1

Frequent Co-Authors

Austin SeamanniD· 1 shared Ferdinando FiorettoiD· 1 shared Jacob K. ChristopheriD· 1 shared Sagar D. KhareiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperMolecular Biology

Austin SeamannORCID

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

Molecular BiologybioRxivPreprintOct 15, 2025

Constrained Diffusion for Protein Design with Hard Structural Constraints

Jacob K. Christopher, Austin Seamann, Jingyi Cui…·Ferdinando Fioretto

This paper introduces a constrained diffusion framework for protein design that enforces strict structural constraints while maintaining structural diversity, achieving state-of-the-art results on motif scaffolding and pocket design tasks.

DOI 10.1101/2025.10.15.682365

protein structurediffusion model

𝕏 PostBluesky