Author

Katherine A. Vernon

Broad InstituteORCID 0000-0003-0879-950XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 3 Molecular Biology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 4 Research Focus:differential expression· 4 Organism:human· 4 Approach:statistical model· 4 Organism:mouse· 3 Assay:scRNA-seq· 3 Research Focus:cell-cell communication· 2 Research Focus:clustering· 2

Frequent Co-Authors

Anna GrekaiD· 5 shared Astrid WeinsiD· 4 shared Ayshwarya SubramanianiD· 4 shared Michal SlyperiD· 4 shared Aviv RegeviD· 3 shared Danielle Ashley DionneiD· 3 shared Jamie L. MarshalliD· 3 shared Julia WaldmaniD· 3 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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5 shared papersGenomics

Anna GrekaORCID

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Author profile →

5 papers

Recent·Most cited

NeuroscienceNature CommunicationsPeer-reviewedMar 9, 2023

Accelerated cognitive decline in obese mouse model of Alzheimer's disease is linked to sialic acid-driven immune deregulation

Stefano Suzzi, Tommaso Croese, Adi Ravid…·Michal Schwartz

This study shows that obesity accelerates cognitive decline in Alzheimer's mice via sialic acid-driven immune changes.

46 citationstop 2%

mousemetabolomics

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Molecular BiologyiSciencePeer-reviewedMar 16, 2022

High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways

Jamie L. Marshall, Teia Noel, Qingbo S. Wang…·Anna Greka

This study uses Slide-seqV2 to identify disease-specific cell neighborhoods and pathways in human and mouse kidneys.

88 citationstop 2%

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GenomicsbioRxivPreprintMay 30, 2021

Obesity-instructed TREM2high macrophages identified by comparative analysis of diabetic mouse and human kidney at single cell resolution

Ayshwarya Subramanian, Katherine A. Vernon, Yiming Zhou…·Anna Greka

The paper identifies obesity-related TREM2high macrophages in diabetic mouse and human kidney through single-cell transcriptomics and cross-species comparison.

13 citations

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GenomicsbioRxivPreprintJun 23, 2020

RAAS blockade, kidney disease, and expression of ACE2, the entry receptor for SARS-CoV-2, in kidney epithelial and endothelial cells

Ayshwarya Subramanian, Katherine A. Vernon, Michal Slyper…·Anna Greka

The paper examines ACE2 expression in kidney cells in relation to RAAS blockers and age/sex, finding age-related differences and associations with drug use.

9 citations

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GenomicsNature CommunicationsPeer-reviewedNov 29, 2019

Kidney organoid reproducibility across multiple human iPSC lines and diminished off target cells after transplantation revealed by single cell transcriptomics

Ayshwarya Subramanian, Eriene-Heidi Sidhom, Maheswarareddy Emani…·Anna Greka

The paper uses single-cell RNA-Seq to assess kidney organoid reproducibility across iPSC lines and shows transplantation reduces off-target cells.

212 citationstop 1%

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