Author

Natalie Geyer

Karolinska InstitutetORCID 0000-0003-1026-968XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 2 Developmental Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:cell-cell communication· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Marco GerlingiD· 3 shared Agneta AnderssoniD· 1 shared Anita GöndöriD· 1 shared Anne Hansen ReeiD· 1 shared Annika ViljamaaiD· 1 shared Argyro Zacharouli· 1 shared Ayushi ChaurasiyaiD· 1 shared Barbara A. ScholziD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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3 shared papersCancer Biology

Marco GerlingORCID

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3 papers

Recent·Most cited

Cancer BiologybioRxivPreprintJan 31, 2026

A distal CTCF-binding site drives MYC expression plasticity in a negative feed-forward loop

Chenying Gao, Mirco Martino, Ayushi Chaurasiya…·Anita Göndör

The paper identifies a CTCF-binding site that regulates MYC expression plasticity through a negative feed-forward loop involving CCAT1 eRNA and MYC protein feedback.

DOI 10.64898/2026.01.28.702300

humanbulk RNA-seq

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Cancer BiologybioRxivPreprintMar 14, 2024

A distinctive tumor compartment in pancreatic lobules defined by nascent stroma and classical tumor cell phenotype

Sara Söderqvist, Annika Viljamaa, Natalie Geyer…·Marco Gerling

This study identifies a distinctive PDAC niche in pancreatic lobules characterized by nascent stroma and classical tumor cell phenotype, highlighting the role of acinar-to-ductal metaplasia and microenvironmental factors in tumor progression.

DOI 10.1101/2024.03.14.584614

humanproteomics

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Developmental BiologybioRxivPreprintMar 6, 2020

Unsupervised cell interaction profiling reveals major architectural differences between small intestinal and colonic epithelial crypts

Jason T. Serviss, Nathanael Andrews, Agneta Andersson…·Martin Enge

The paper develops CIM-seq to profile cell interactions in mouse intestinal tissues, revealing distinct stem cell niche architectures in small intestine and colon.

1 citation

mousescRNA-seq

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