Author

Deborah J. Andrew

Johns Hopkins UniversityORCID 0000-0003-1051-6935Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:Drosophila· 5 Approach:experimental assay· 5 Research Focus:cell type annotation· 3 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Assay:scRNA-seq· 2 Assay:ATAC-seq· 1 Assay:ChIP-seq· 1

Frequent Co-Authors

Ji Hoon KimiD· 2 shared Nathaniel LaughneriD· 2 shared Patrick CahaniD· 2 shared Vidya Ajay· 2 shared Ankita Holenarasipura· 1 shared Da PengiD· 1 shared Daniel C. LevingsiD· 1 shared Devin A. VertreesiD· 1 shared

Activity by Year

2021-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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2 shared papersDevelopmental Biology

Ji Hoon KimORCID

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5 papers

Recent·Most cited

GenomicsGeneticsPeer-reviewedMay 11, 2026

VIDEO - Visual Integration of Drosophila Enhancer Organization: A tool for integrating and visualizing chromatin accessibility, in vivo transcription factor binding and motif occurrence in tissue-specific differentially expressed genes

Vidya Ajay, Nathaniel Laughner, Patrick Cahan, Deborah J. Andrew

VIDEO is a web-based tool that integrates and visualizes chromatin accessibility, TF binding, and motif occurrence in tissue-specific genes to explore gene regulation in Drosophila.

DOI 10.1093/genetics/iyag117

DrosophilaATAC-seq

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GenomicsGeneticsPeer-reviewedOct 7, 2025

CrebA regulation of secretory capacity: Genome-wide transcription profiling coupled with in vivo DNA binding studies

Dorian J Jackson, Da Peng, Santosh P Shinde…·Deborah J. Andrew

The paper investigates how CrebA regulates secretory capacity by analyzing gene expression and DNA binding in Drosophila embryos using scRNA-seq and identifies SPCGs as major targets.

3 citations

DrosophilascRNA-seq

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Developmental BiologyThe Journal of Cell BiologyPeer-reviewedJun 3, 2025

Arc controls organ architecture through modulation of Crb and MyoII

Ji Hoon Kim, Rika Maruyama, Kwon Kim…·Deborah J. Andrew

The paper investigates Arc's role in regulating Drosophila salivary gland morphology by modulating Crb and MyoII activity during tissue invagination.

3 citations

Drosophilaexperimental assay

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Developmental BiologyThe Journal of Cell BiologyPeer-reviewedJan 25, 2022

The Ribb-osome: Ribbon boosts ribosomal protein gene expression to coordinate organ form and function

Rajprasad Loganathan, Daniel C. Levings, Ji Hoon Kim…·Deborah J. Andrew

The paper identifies Ribbon as a regulator of ribosomal protein gene expression during early cell growth in Drosophila salivary glands and trachea, showing context-dependent mechanisms.

12 citations

DrosophilaDNA methylation

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Developmental BiologyGeneticsPeer-reviewedJun 26, 2021

Isoform-specific roles of the Drosophila filamin-type protein Jitterbug (Jbug) during development

SeYeon Chung, Thao Phuong Le, Vishakha Vishwakarma…·Deborah J. Andrew

The paper characterizes Jbug isoforms in Drosophila, showing their differential expression, maternal contribution, and specific roles in actin structures and Crumbs localization.

3 citations

Drosophilaexperimental assay

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