Ajita Shree

This paper benchmarks spatial deconvolution and domain detection methods across diverse tissues and technologies, identifying top-performing approaches and highlighting method limitations.

This study maps dynamic changes in murine pancreatic islet cell composition and transcriptional states during hyperglycaemia progression using single-cell multi-omics data.

scDREAMER integrates single-cell datasets across batches and species using a deep generative model and adversarial classifier, outperforming existing methods in batch correction and scalability.