Author

Jacob S Rozowsky

Broad InstituteORCID 0000-0003-1101-3168Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 3 Research Focus:cell type annotation· 2 Research Focus:clustering· 2 Approach:deep learning· 2 Assay:scRNA-seq· 2 Research Focus:spatial domain detection· 2 Assay:spatial transcriptomics· 2 Approach:statistical model· 2

Frequent Co-Authors

Carlos Alberto Oliveira de BiagiiD· 2 shared Costanza Lo CascioiD· 2 shared Johannes GojoiD· 2 shared Mariella G. FilbiniD· 2 shared Shashank KatiyariD· 2 shared Adam C Resnick· 1 shared Alexandra DananbergiD· 1 shared Alicia-Christina Baumgartner· 1 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersCancer Biology

Carlos Alberto Oliveira de BiagiORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Cancer BiologyCell ReportsPeer-reviewedOct 26, 2026

A context dependent hierarchy of APOBEC3A and APOBEC3B mutators in lung adenocarcinoma

Josefine Striepen, Luka Culibrk, Alexandra Dananberg…·John Maciejowski

This study identifies heterogeneous roles of APOBEC3A and APOBEC3B in lung adenocarcinoma mutagenesis using CRISPR-Cas9 and whole-genome sequencing of single-cell clones.

2 citationstop 4%

humanwhole-genome sequencing

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Cancer BiologybioRxivPreprintJul 16, 2026

Single-cell multi-omic analyses resolve the cellular diversity of ALK/ROS1/MET/NTRK-fused gliomas in infants and older children

Andrea Joseph De Micheli, Carlos Alberto Oliveira de Biagi, Costanza Lo Cascio…·Ana Guerreiro Stücklin

The paper uses single-cell and spatial multi-omic analyses to characterize cellular diversity in RTK-fused gliomas across pediatric age groups, identifying distinct cancer cell states and myeloid subgroups.

DOI 10.64898/2026.07.16.738862

humanscRNA-seq

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Cancer BiologyNaturePeer-reviewedMar 11, 2026

Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas

Daeun Jeong, Sara G. Danielli, Kendra K. Maaß…·Mariella G. Filbin

This study integrates single-cell and spatial transcriptomics with live-cell imaging to characterize tumor heterogeneity in supratentorial ependymomas, revealing distinct progenitor-like states and spatial organization patterns.

5 citationstop 1%

humanscRNA-seq

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