Silvia Salatino

Nanopore shotgun metagenomics of 56 Kent woodland soils finds stable alpha diversity but significantly shifted KEGG functional composition two years after European bison release.

The paper identifies a de novo enhancer mutation in KCNB1 causing ST Depression Syndrome, a cardiac arrhythmia, and shows it can be predicted by a deep neural network.

This study compares the accuracy and efficiency of DNA barcode sequencing using Oxford Nanopore Technologies and Pacific Biosciences, finding ONT's R10 & Q20+ chemistry combination provides the highest success rate.

The paper introduces methods to improve disease-gene association and variant pathogenicity interpretation by incorporating missense residue position information.

Crunch automates ChIP-seq analysis and identifies regulatory motifs, finding that TFs either use single motifs or multiple co-occurring motifs in binding peaks.