Piotr Wojciech Dąbrowski

PathoLive detects pathogens in real-time from metagenomic data, improving speed and accuracy by prioritizing clinically relevant hits over contaminants and irrelevant sequences.

The paper evaluates metagenomic software tools using realistic datasets, highlighting improvements in assembly and taxon profiling while identifying remaining challenges in virus/archaea detection and reproducibility.

seq-seq-pan constructs a dynamic whole genome alignment framework for pan-genomics, enabling efficient updates and integration of multiple reference genomes.