Author

Alex P. Reynolds

Altius Institute for Biomedical SciencesORCID 0000-0003-1409-8945Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 4

Signature Assays, Organisms & Methods

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Assay:ChIP-seq· 4 Organism:human· 3 Approach:statistical model· 3 Research Focus:database / resource· 2 Assay:DNA methylation· 2 Research Focus:gene regulatory network inference· 2 Approach:benchmark study· 1 Approach:experimental assay· 1

Frequent Co-Authors

Daniel BatesiD· 3 shared Douglas Dunn· 3 shared Eric HaugeniD· 3 shared Eric RynesiD· 3 shared Fidencio Jun Neri· 3 shared Jessica M. Halow· 3 shared John A. StamatoyannopoulosiD· 3 shared Kristen LeeiD· 3 shared

Activity by Year

2020-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Daniel BatesORCID

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Author profile →

4 papers

Recent·Most cited

GenomicsbioRxivPreprintJun 26, 2026

EpiATLAS - a reference for human epigenomic research

Quirin Manz, Misha Bilenky, Dennis Hecker…·Samuel A. J. R. Aparicio

EpiATLAS provides a comprehensive collection of human reference epigenomes to advance epigenomic research and understanding of cellular function and disease.

2 citations

humanChIP-seq

𝕏 PostBluesky

GenomicsNaturePeer-reviewedJul 29, 2020

Index and biological spectrum of accessible DNA elements in the human genome

Wouter R. A. Meuleman, Alexander Muratov, Eric Rynes…·John A. Stamatoyannopoulos

The paper creates high-precision maps of DNase I hypersensitive sites across 733 human biosamples and develops a regulatory vocabulary to annotate regulatory DNA, concentrating disease-associated signals.

331 citations

humanChIP-seq

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GenomicsNaturePeer-reviewedJul 29, 2020

Global reference mapping and dynamics of human transcription factor footprints

Jeff D. Vierstra, John E. Lazar, Richard S. Sandstrom…·John A. Stamatoyannopoulos

The paper maps transcription factor footprints across 243 human cell and tissue types, revealing their structure, function, and relationship to genetic variation and disease.

386 citationstop 1%

humanDNA methylation

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GenomicsbioRxivPreprintJun 26, 2020

Atlas and developmental dynamics of mouse DNase I hypersensitive sites

Charles E. Breeze, John E. Lazar, Tim R. Mercer…·John A. Stamatoyannopoulos

The paper creates a mouse regulatory DNA atlas by mapping DNase I hypersensitive sites across development and shows dynamic changes in regulatory elements and transcription factor activity.

11 citations

mouseChIP-seq

𝕏 PostBluesky